Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863066.1_cds_XP_016515530.1_27864
CDS Infomation

[gene=LOC107832228] [db_xref=GeneID:107832228] [protein=fidgetin-like protein 1 isoform X2] [protein_id=XP_016515530.1] [location=join(39981..40243,41059..41197,41405..41755,50496..50737,50913..51159,51234..51326,51480..51581,52139..52241,52478..52561,52646..52741,52879..53006,53137..53160,53755..53823)] [gbkey=CDS]
Sequence

ATGGAGGACGAAAAATCGGAGGTATCATGGAGGAAAGAAATTGACACGAATCTGAAGAGG
CTCCACTCAATGCTATTTGGAGCAGAAGTAGCTCTCGAAAAGAAGGATTTCAGTTCCGCA
ACAGTACTTGGATTAGGACTCATCGGCTTCCTCGATTCGCATTCTCATTCCGACGTCGAC
GATGCCTTCATTCGTCCAATTCGCTGTGAAGCTTTGTCTAAGTTTGATTCTGCTCGACGC
TCTCTCATTACTGAATCCGATCGCCACGCCTTTGAACAAGCAGGCAGAGATCCAGGCTGC
ATATTTACCAAAGAAAAAGATATTGATGTTGAGAAGATTAAGCAGTCCAAGTACTTTCTT
TCTCTTTTTCAGCAACACGAAGGCATAACTATAGGTGAACAGGGGAATCAATTAAAAAGG
CGTGACAATGTGGGTAGCAGGACCTGGAAAACGCCTGCACAAACGAGTCCGAGAGATTTC
TCCATGATGAAGAATAGAAGCTTTGCAAATGATAGTAGCCCAGAGGTTCGCCCTGTTGAA
AGGTTTCTCACAAAGCATAACTACCTAAAGCATCAAGTCGTGGACATTAAAGATGAAGAG
GAAGAAAGAACCTGTAACAATGGTTCCAAAACAAGACGGTTGCACAGGGAAAGCAGTGGC
TCTAGAGATGAAAACATTTCATCCCCCTTGTGCGCTGAAGAAACTGATGCTGATGCTTCC
GCGAGTGGATTTGTTACTGCTAAAACAAAGCTGGAAATGGACACAAGACAGAGGCGAGGG
TTGAGTAGATCACCAAGTGCTTCAATCTCCCCACAAAGTGATAACACCTTGACGAACAAA
GGCTGTGGAGTCAGGTCCTATGGTTTTCCACGACGTGGTGTACGAGGCAATTTCGTTCCT
CCTATCAGAGGTAGTAGTGGCAATAATGTAGGCAATGTTAGTTCTCGCAATGCTGGGAAA
GGAGAAGATACATTAGATGACTCAACAAGGAGATGTTTGGAAATGTTAGTTGGTCCTGAT
GGTGAGCTACCTGAGAAATTGAGGAATATAGAGCCTCGGCTTATTGAGCATATCAGCAAT
GAGATTATGTACCGCGATCCCAATGTGCGGTGGAATGACATTGCTGGCCTGGAACATGCT
AAAAAATGTGTGACTGAGATGGTCATCTGGCCATTATTACGTCCAGACATATTCAGAGGC
TGCCGATCTCCAGGGCGAGGTCTTCTTCTGTTTGGTCCACCAGGAACTGGCAAAACAATG
ATAGGGAAAGCTATTGCTGGCGAGGCAAAAGCGACCTTCTTTTACATATCTGCCAGCTCT
TTGACAAGCAAGTGGATCGGAGAGGGGGAGAAGTTGGTGAGGGCACTTTTTGGAGTTGCC
AGTTGTCGTCAGCCTGCTGTTATCTTTGTTGATGAAATAGATTCTCTGCTGTCTCAGCGC
AAGTCAGAAGGTGAACACGAATCTAGTAGGCGCTTGAAGACACAATTTCTGATTGAGATG
GAGGGCTTTGACACTGGGAGCGAACAAATTCTTCTTATAGGTGCAACAAACAGGCCCCAA
GAACTTGATGAGGCTGCAAGGAGACGACTTACTAAGAGACTTTATGTTCCACTTCCTTCC
TCAGAGGCAAAAGCTTGGATCATCAAGAGTCTATTGGAAAAGGATGGGTTATTTAAGCTC
TCAGATGAGGATATTGTCTCCATTTGCAGATTAACGGAAGGGTATTCTGGGTCTGACATG
AAGAATTTAGTGAAGGATGCTTCCATGGGTCCATTAAGGGAAGCTCTTAAGCAGGGTATT
GAAATTACAAAGCTAGAGAAGGAGGACATGAGGCCCGTAAATCTTCAGGACTTTGAGGAT
GCGTTACAAGAGCTTCTGAATTGGGATGATGATGAAAGGTCATTTGCTGCTGGTATAACG
CCTTGTTTACACATTCGCTGA

Peptide Sequence

PEP ID

XP_016515530.1
PEP Infomation

PREDICTED: fidgetin-like protein 1 isoform X2 [Nicotiana tabacum]
Sequence

MEDEKSEVSWRKEIDTNLKRLHSMLFGAEVALEKKDFSSATVLGLGLIGFLDSHSHSDVD
DAFIRPIRCEALSKFDSARRSLITESDRHAFEQAGRDPGCIFTKEKDIDVEKIKQSKYFL
SLFQQHEGITIGEQGNQLKRRDNVGSRTWKTPAQTSPRDFSMMKNRSFANDSSPEVRPVE
RFLTKHNYLKHQVVDIKDEEEERTCNNGSKTRRLHRESSGSRDENISSPLCAEETDADAS
ASGFVTAKTKLEMDTRQRRGLSRSPSASISPQSDNTLTNKGCGVRSYGFPRRGVRGNFVP
PIRGSSGNNVGNVSSRNAGKGEDTLDDSTRRCLEMLVGPDGELPEKLRNIEPRLIEHISN
EIMYRDPNVRWNDIAGLEHAKKCVTEMVIWPLLRPDIFRGCRSPGRGLLLFGPPGTGKTM
IGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQR
KSEGEHESSRRLKTQFLIEMEGFDTGSEQILLIGATNRPQELDEAARRRLTKRLYVPLPS
SEAKAWIIKSLLEKDGLFKLSDEDIVSICRLTEGYSGSDMKNLVKDASMGPLREALKQGI
EITKLEKEDMRPVNLQDFEDALQELLNWDDDERSFAAGITPCLHIR

Transcript Sequence

Gene sequence data has not been registered.